BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035A07LP1|AL429982
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1866 0.0
>3x_Contig1397
Length = 8011
Score = 1866 bits (937), Expect = 0.0
Identities = 956/965 (99%), Gaps = 1/965 (0%)
Strand = Plus / Plus
Query: 1 atccaaagacacgcagcggctttccaaaagaaaactaggacagataaaacaggattatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3674 atccaaagacacgcagcggctttccaaaagaaaactaggacagataaaacaggattatct 3733
Query: 61 aaccgaaaaccaacacagatccaactgaactgaatcaagtacaggaaatccgaagaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3734 aaccgaaaaccaacacagatccaactgaactgaatcaagtacaggaaatccgaagaatat 3793
Query: 121 tctgtatttcaaatcaaataaaaccaactcacaaacaccgtttattaaacaagtgatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3794 tctgtatttcaaatcaaataaaaccaactcacaaacaccgtttattaaacaagtgatgga 3853
Query: 181 tggtggattaaaaaaaaaagaaaaaaagatgagggaaaagaggatgatatatggttcggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3854 tggtggattaaaaaaaaaagaaaaaaagatgagggaaaagaggatgatatatggttcggc 3913
Query: 241 ctggtgaatgttatacttccccgagtcctaataatatatcccttgagtgatgaagaactt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3914 ctggtgaatgtaatacttccccgagtcctaataatatatcccttgagtgatgaagaactt 3973
Query: 301 tgtccgttgaccttctgamaacctcatcaaaaagatacctaactgtacgtacacaaaata 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3974 tgtccgttgaccttctgaaaacctcatcaaaaagatacctaactgtacgtacacaaaata 4033
Query: 361 acaagcatttaaactatataggttgawatttatatatttttctcttgtttttttttcttt 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4034 acaagcatttaaactatataggttgaaatttatatatttttctcttgtttttttttcttt 4093
Query: 421 cattttgacaaatcgaagaaaaagaaaaagaacttcgttctaaagtggaaacttaatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4094 cattttgacaaatcgaagaaaaagaaaaagaacttcgttctaaagtggaaacttaatgag 4153
Query: 481 ctttaagttagttcagctgamatatactgactgacattcagaaaaactgamattgttcta 540
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 4154 ctttaagttagttcagctgaaatatactgactgacattcagaaaaactgaaattgttcta 4213
Query: 541 gttacaaagacacgaagtagggaaavaggaaaaagaagcgaaayattataagattgtgag 600
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 4214 gttacaaagacacgaagtagggaaaaaggaaaaagaagcgaaaaattataagattgtgag 4273
Query: 601 gtctgaaaactggaaattcgaatcaataccgggttgaatgaatcatgatccagaaagaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4274 gtctgaaaactggaaattcgaatcaataccgggttgaatgaatcatgatccagaaagaat 4333
Query: 661 acagcaaacagagaaaatttttttctgtgtcagcatccgctgcggggtttcttagggtga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4334 acagcaaacagagaaaatttttttctgtgtcagcatccgctgcggggtttcttagggtga 4393
Query: 721 gtgggttaaacatcgaatgactaaacagggaaacaccaggtgcaatacctgttgcttgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4394 gtgggttaaacatcgaatgactaaacagggaaacaccaggtgcaatacctgttgcttgtt 4453
Query: 781 actcactgttacacactgttactagctgatacttagggacaagctgttggggctgaagct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4454 actcactgttacacactgttactagctgatacttagggacaagctgttggggctgaagct 4513
Query: 841 ccggtagaggactggcagttcggtagacgaaagctgtatctggcatctcatttcatcgtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4514 ccggtagaggactggcagttcggtagacgaaagctgtatctggcatctcatttcatcgtg 4573
Query: 901 tatacggtttgaattccattgtcgagatttagtacggctgaa-ccmcggaatgtgataat 959
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 4574 tatacggtttgaattccattgtcgagatttagtacggctgaacccacggaatgtgataat 4633
Query: 960 aggta 964
|||||
Sbjct: 4634 aggta 4638
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,104
Number of Sequences: 1807
Number of extensions: 11104
Number of successful extensions: 240
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)